Module goat_cli::lookup

Query the GoaT lookup API.

Invoked by calling: goat-cli taxon/assembly lookup <args>

The state of the code here is not great, it’s quite fragmented. Functional, but lacks coherence.

Probably should be refactored at some point.

Modules

lookup

The inner structs used in lookup.

Functions

lookup

Main entry point for goat-cli lookup.

process_assembly_results 🔒

The assembly counterpart to the above function.

process_taxon_results 🔒

As the taxon and assembly return JSON’s are in different structures, they have to be parsed differently.